Türkoba Mahallesi,Erguvan SokakNo:26 / K 34537
Tepekent - Büyükçekmece
Kemalpaşa Mahallesi Halkalı Caddesi No:101 34295Sefaköy - KüçükçekmeceIstanbul-Turkey
Merkez Efendi MahallesiEski Londra Asfaltı Cd. No 1/3, 34010 Cevizlibağ - Zeytinburnuİstanbul-Türkiye
T.C. Istanbul ArelUniversity
Department of Biomedical EngineeringCourse Content
6BMHTBA001 - Algorithms and Programming-ı
Algorithm concept, flow charts, programming and programming language, structural programming concept, array (vector) concept, sorting and searching algorithms, multi-dimensional arrays (matrices), using file and basic knowledge about files, format concept and input output formatting, subprogram concept, recursion and recursive subprogram/function examples.
6ING103 - English-I
English speaking, writing, listening and speaking practices and grammar knowledge.
6BIOTBA006 - Introduction to Biomedical Engineering
Fundamental engineering concepts, problem-solving technics in engineering, communication skills in engineering, International Unit Systems, fundamental concepts of the department
6BIOTBA001 - Introduction to Chemistry
Matter-its properties and measurements, Atoms and the atomic theory, The periodic table and some atomic properties, Chemical bonding, Chemical compounds, Chemical reactions, Acids and bases, Properties and reactions of functional groups in organic chemistry.
6MMFTBA005 - Mathematics-I
Funtions and their properties, limit rules, infinitive limits, contiunity, definiton of the differentials and rules, L'Hospital rule, applications of the differentials, graphs and their drawings, undefinite integral.
6MMFTBA007 - Physics-I
Vectors and the other quantities. One, two and three dimensional kinematics. Applications of the Newtonian mechanics, work-power and energy, momentum, rotating body dynamics, equilubrium and elasticity.
6UYDTDL101 - Turkish Language-I
World languages, historical periods of Turkish, phonetical and structural features of Turkish.
6ING104 - English-II
The development of English grammar, speaking, writing, listening and reading competencies.
6BIOTBA008 - Fundamentals of Circuit Theory
6BIOTBA002 - General Biology-I
Carbon and life, cell structure, function and metabolism, organelles, genetics, DNA replication, mutations, proteins, nucleic acids, microorganisms, cell imaging techniques, virus, biotechnology and its applications.
6BIOMAU001 - Introduction to Clinical Engineering
Definition and Basic Principles of Clinical Engineering, Medical Gas Systems, Sterilization, Safety Management in Healthcare Institutions, Electrical Safety in Healthcare Institution, Radiation Safety in Healthcare Institution, Biological Safety in Healthcare Institution, Medical Waste Management in Healthcare Institution, Total Quality Management (TQM) in Healthcare Institution, Performance Improvement in Healthcare Institution Standards for Biomedical Instrumentation, Infrastructure Systems in Operating Room and Intensive Care Unit, Arrangement of Technical Specification.
6BIOTBA007 - Linear Algebra and Applications
Matrix algebra, linear equation systems, vector spaces, linear transformations, inner space products, orthogonality, determinants, problems of eigenvectors and eigenvalues
6MMFTBA006 - Mathematics-II
The Riemann Integral, applications of integral, area, lentgh of the curve, areas of surface of revolution and volume of surface, polar coordinates, complex numbers, sequence and series, infinite series, power series, absolute and conditional convergence, Taylor's series and Maclaurin series with applications.
6MMFTBA008 - Physics-II
Electric charges and electric field, Gauss's law, electric potential, capacitance and dielectrics, current, resistance, and emf, direct current circuits, magnetic field, sources of magnetic field, electromagnetic induction, alternating current and electromagnetic waves.
6UYDTDL102 - Turkish Language-II
Word groups, structure of sentences, sentence types, expression mistakes.
6BIOTBA005 - Anatomy and Physiology
The Chemical Level of Organization, The Cellular Level of Organization, The Tissue Level of Organization, Integumentary System, Locomotor System (joints, bones, ligaments), Nervous System (Brain and Nerves, Muscles, Sensory Organs ), Cardiovascular System, Lymphatic System, Immune System, Respiratory System, Digestive System, Fluid-Electrolyte and Acid-Base Homeostasis, Endocrine System, Reproductive System, Fluid-Electrolyte and Acid-Base, Urinary System.
6BIOTBA004 - Biophysics
Biophysics, Bioenergetics, Action Potentials and Synaptic Transduction, Fundamentals of Biologicl Control, Bioelectrical Potentials, Circulation Dynamics, Respiratory Dynamics, Biological Receptors, Psychophysics, Information in Biological Systems, Radiation Biophysics, Non-ionizing Radiation and Specific Absorption Rate (SAR).
6BIOMAU101 - Circuit Analysis
6EEMYGD001 - Electric Circuits Laboratory
Definitions and units, Kirchhoffs current and voltage laws, Circuit analysis methods (superposition theorem, Thevenin and Norton equivalent), First order circuits, RLC circuits.
6MMFTBA010 - Engineering Mathematics
Numerical solutions of ordinary differential equations, partial differential equations, Vector analysis, Laplace Transforms, Vector Analyses.
6UYDCKI001 - Environmental Protection, Occupational Health and Safety
This course covers the topics such as preventing the deterioration and destruction of the environmental values and ecological balance, repairing the existing distortions, basic information to prevent environmental pollution, historical development and importance of work safety, general view of work safety in our country and occupational health and safety legislation, rules of work safety, sources of hazards, determination of hazards, risk assessment, control of risks, occupational diseases, occupational accidents, physical, chemical, biological, and psychological factors in terms of the effects on worker's health.
6UYDATA101 - Principles of Atatürk and History of Reforms-I
In this course, ideas and principles during the birth and development of modern Turkey are discussed.
6UYDMSE001 - Professional Liability and Ethics
The course includes the definition, purpose, and principles of ethics , its relation to law, evaluation of the concepts of profession, institution and social responsibility, reasons for professional corruption and unethical behavior in professional life, their results and solutions.
6UYDEDY001 - Critical Thinking, Creativity and Entrepreneurship
Contemporary theories and approaches about thinking towards induction and deduction methods, ways of critical assessment, ways of critical evaluation, the relationships between creativeness and innovation, the application of innovation and using innovation as a core competence for entrepreneurship are taught in this class.
6BIOMAU102 - Digital Design
6EEMTBA011 - Electromagnetic Field and Wave Theory
Static Magnetic Fields, Magnetic circuits, time-variant fields, Maxwell equations, wave propagation in space, polarization, reflection and transmission of plane wave, wave guides.
6EEMMAU204 - Electronics-I
Diode, Transistor and FET Devices, Analysis and operating principles of electronic circuits, Performance criteria of electronic circuits.
6UYDATA102 - Principles of Atatürk and History of Reforms-II
Political reforms, legal reforms, educational and cultural reforms, economic reforms, social reforms, Atatürk’s principles, Atatürk’s foreign policy, Turkey in the World War II, Turkey between 1950- 1960.
6BMHMAU102 - Probability
Sample spaces and events, axioms of probability, conditional probability and independence, random variables, Binomial, normal and Poisson distributions.
6EEMMAU202 - Signals and Systems
Continuous time signals, discrete time signals, analysing the fundamental properties of systems, Linear Time Invariant systems, Fourier series expansion of Fourier Series, continuous time and discrete time Fourier transforms, Sampling theorem, Laplace transform, z transform.
6BIOMAU012 - Biomedical Image Processing
Classification of medical imaging modalities, Quality control and enchanment of image quality, image processing and its mathematical background, 2D image reconstrcution, 3D image reconstruction, other related reconstruction techniques, medical applications of virtual reality technologies
6BIOMAU005 - Biomedical Instrumentation-I
The concept of measurement in biomedical engineering, errors in measurement, Noise in signal measurement, General static characteristics, General Dynamic characteristics, Transducers, Amplifiers, Measurement of biomechanical parameters (force, acceleration, torque), Measurement of Pressure, Catheters, Principles of Flow Measurement, Principles Body Temperature and Body Measurements, Bioelectircal and biomagnetic measurements, Optical Methods in biomedical engineering, Acoustic Methods in biomedical engineering, Spectroscopic methods in medicine, Non-invasive ultrasonic methods and piezoelectric systems, Non-invasive applications of photon radiation, Detectors used in nuclear medicine and measurement of radioactivity.
6BIOMAU007 - Biostatistics
Descriptive Statistics, Probability, Discrete Probability Distributions, Continuous Probability Distributions, Estimation and Sampling, Hypotheis Testing, Correlation and Regression Analysis, Variance Analysis, Non-parametric Tests, Time-series analysis, Covariance analysis, Logistic Regression, Design and Analysis Techniques in Epidemiologic Studies, Use of SPSS and applictions.
6EEMMAU305 - Electronics-II
Biasing typical transistor circuits,cascade amplifiers, biasing cascade amplifiers, common emitter, common base and common collector amplifiers, Darlington connection, MOSFET and JFET amplifiers, applications of linear and non-linear operation amplifiers, feeding circuits, power amplifiers.
6UYDKGS001 - Quality Assurance and Quality Management Systems
This course comprises the issues related to quality management concept and principles, the various tools available to achieve quality management systems successfully, statistical approach for quality control, ISO and QS certification process.
6UYDSPR001 - Strategic Planning, Project and Risk Management
Strategic management, strategic planning, planning process, risk management, project design and management are some of the topics that will be discussed during the course.
6BIOMAS050 - Technical Elective Course-I
The course introduces first the conditions that non-viable biomaterials have to fulfill to be used as biomaterial. In the next part the specific material families such as metals, ceramics and polymers are discussed in more details with special attention to specific materials in every family.
Cellular biomechanics, Application of engineering mechanics to human neuromuscular system, Mechanical properties of tissues, Structural characteristics of the locomotor system and mechanical analysis, Dynamic charactersitcs of mechanical systems, Hemodynamics, Circulation biomechanics, Respiratory biomechanics, Orthopedic biomechanics and study of the mechanical characteristics of orthopedic materials, Tension in medical materials and unit deformations, Gait Analysis, Sport and Exercise Biomechanics, Dentall biomechanics, Cochklear and Vestibular System Mechanic Application of Biomechanics in Various Industrial Fields.
The goal of this course is to provide an insight into the fundamentals of
nanotechnology in biological and biomedical research. The nanotechnology will have far reaching impacts is solving biological/medical problems. The emergence of solid-state devices at the nano-scale has spurred a new area for the sensing of biological species. The utilization of novel device designs and techniques have resulted in unprecedented sensitivity and selectivity. This course is designed to explore the applications of nanotechnology in sensing and detecting biological molecules, interactions and systems. The course caters for the interests and needs of students coming from different backgrounds. Basic biological molecules and the importance of their detection are discussed. Focus is also provided on solid-state materials, devices and systems as related to biological applications especially detection and sensing, covering top-down MEMS fabrication and bottom-up biochemistry. The state of the art in BioMEMS and bio-nanotechnology is covered with particular emphasis on various subjects.
Worker-machine environment systems, design and evaluation; applications to consumer products, tools, equipment and the workplace. Consideration of anatomical, physiological and psychological capabilities and limitations as related to systems design and human performance. Use of anthropometric data in design of display and control systems. Effects of environmental stress upon work performance, safety, and health.
In this course content various manufacturing sectors were included. Here basic metal types, manufacturing methods, ceramics (traditional, advance ceramics) and their manufacturing methods, plastics, welding, coating technologies, petro-chemistry industries were explained. As last advance sector the electronic sector was introduced. As the newest topic the basic developments at nano was explained.
Physiology of Training, fundamentals of biomechanics in evaluation of physical performance and training, biomechanics of sport injuries, and how to avoid injuries, fundamentals of kinesiology, fundamentals of biomechanics in rehabilitation, experiment design and data collection in research in sports medicine, sensor technologies in sports medicine, biomechanics in equipment design for training, doping technologies and legal issues.
The course content includes background information on biomaterials, cell/tissue interactions with materials, tissue development and growth, latest new approaches to tissue regeneration and replacement of function.
Definition of Physiopathology, Physiopathologic alterations in Cellular Level, Physiopathologic Alterations in Infectious Diseases, Physiopathologic Mechanisms Playing Role in the Formation of Neoplasia, Alterations in Immune System, Alterations in Cardiovascular System, Alterations in Respiratory System, Alterations in Urinary System, Alterations in Gastrointestinal System, Alterations in Endocrine System, Alterations in Reproductive System, Alterations in Nervous System, Alterations in Skeletal and Integumentary System.
6BIOMAU008 - Biomaterials
Content of the course directly impacts many disciplines within the field of biomedical engineering. This interdisciplinary course provides an introduction to biomaterials research as related to medicine and biotechnology, with emphasizing of the interactions between chemistry, materials and biological structures.Basic issues (metals, ceramics, polymers etc.) related to the function of biomaterials are explored based on their biocompatibility, stability, interfaces, and behavior in the body.
6BIOMAU006 - Biomedical Instrumentation-II
Measurement of biopotentials, Measurement of evoked potentials, Audolgy systems, Blood Pressure Measurement Systems, Blood Flow Measurment Systems, Respiratory Measurement Systems, Therapeutic Systems, Biomedical Systems in Intensive Care Unit, Clinical Laboratory Systems, Electrosurgical Units, Medical Imaging Systems, Fiber optics in Medicine and Lasers in Medicine, Electrical Saftey in Medical Techologies, Electromagnetic Interactions in Biomedical Instruments.
6BIOMAU014 - Biomedical Signal Processing
6EEMYGD003 - Electronics Circuits Lab.
Diodes, Biasing typical transistor circuits,cascade amplifiers, biasing cascade amplifiers, common emitter, common base and common collector amplifiers, Darlington connection, MOSFET and JFET amplifiers, applications of linear and non-linear operation amplifiers, feeding circuits, power amplifiers.
6BIOYGS001 - Medical Informatics
Medical data record in health institutions, medical e-data, clinical information systems (hospital, policlinic, nursing care, laboratory, pharmaceutics, radiology, data management systems), decision support systems, clinical research and therapeutics systems, the term technology in health institutions.
6UYDSSU001 - Social Responsibility and Community Service
This course comprises fundamentals of social responsibility and basic information on the topics of social work of individuals, groups and businesses.
6BIOMAS053 - Technical Elective Course-II
Introduction to principles of MRI, magnetization, precession, Larmor frequency, relaxation, gradients and signal generation, k-space, pulse sequences, image presentation, artifacts, DTI, fMRI
The goal of this course is to provide an insight into the Basic Concepts of Polymers, Physical and Chemical Properties of Polymers, Condensation Polymerization, Addition Polymerization, Thermoset and Thermoplastic Polymers, Mechanical and Deformation Properties of Polymers, Thermal Properties of Polymers, Polymer Fibers and Polymer Films, Polymer composites and polymer coatings, Biopolymers, Smart polymers and polymer gels, Biopolymer systems, physico-chemical and biological properties, biotechnology applications.
Introduction to microprocessor-based systems, digital representation and binary arithmetic, logic elements and hardware devices, memory and expansion of memories, the structure of the central processing unit (CPU) and its operation, input/output and direct memory access (DMA), the PIC16F877A and its structure, addressing modes and instructions set, subroutine, interrupt and stack structure, data transfer, the assembly and directives.
6BIOMAS009 - Biosensors
Definition of Biosensor and Chemoreceptor analogs, Classification of Receptor Components in Biosensors, Function of Transdücers and Their Structures, Biochemical Fundamentals of Biosensors, Modelling Biosensors, Classification of Biosensors, Immobilization of receptor components, Manufacturing Biosensors, Metabolism Biosensors, Affinity Biosensors, Application of Biosensors, Biochips and BioMEMS, Nanobiosensors.
6BIOMAU010 - Graduation Design Project
Definition of the problem, Literature Survey, Improving Models, Improvement Report Presentation, Analysis of Results & Reporting, Final Presentation.
6BIOMAS051 - Technical Elective Course-III-IV
Clinical Laboratory Systems, Molecular Absoroption Spectroscopy, Amotic Emission and Absorpt,on Spectroscopy, Molecular Emission Spectroscopy, Electrochemistry, Electrophoresis and Densitometry, Chromatography, Osmometry, Nephelometry and Turbidimetry, Gas Chromatography, Mass Spectrometry, Biosensors, Auto-analyzer systems, Automation in Clinical Laboratories, Ophthalmoscopes and Autoscopes, Endoscopes and CCD Cameras, Stethescopes, Medical Imaging Systems (X-Rays, Ultrasonography, Magnetic Resonance Systems, Computerized Tomography, Gamma Cameras, SPECT,Positron Emission Tomography, Angiography, Mammography),Mechanic Ventilators, Anesthesia Devices, Lithotripsy, Hemodialysis SYstems, Pacemakers, Electrical Stimulators, Defibrillators, Mechanic Cardiovascular Orthotic and Prosthetic Devices, Drug delivery systems, Surgical equipments, electrosurgical systems,Physical therapy instruments, Diathermy, Radiotherapy systems.
Electrical stimulation of central nervous system, transcutaneous electrical nerve stimulation (ENS) for ambulation: Parastep system, electrodes used for cortical control signals, ENS for paraplegia, neural prosthetics, visual prothesis, TMS in deep brain regions, neuromodulations for epileptic seizures.
The term rehabilitation, Engineering consepts in sensory rehabilitation, Engineering consepts in speech rehabilitation, orthotic and prosthetic devices, wheelchair technologies, neural prosthetics based on functional electrical stimulation (FES), transfemoral prosthesis, visual system rehabilitation technologies, audio rehabilitation.
Optics in medicine, and principles of Laser applications, light in biomedicine, incoherent light sources, fundamentals of Laser fiberoptics, Laser-Doppler amperemeter, colorimeter, types of photometers, UV - visible spectroscopy, Infrared spectroscopy, optical coherence tomography, principles of therapeutic Laser, tissue optics and measurement techniques, photochemicals, photodynamic theraphy, biostimulation, Laser in clinical use, CO2 Laser in brain operations, Nd:YAG Lasers in gastrointestinal bleeding, Laser in ophtalmology, Safety.
Physiologic Control Systems, Mathematical Modelling, Static Analysis of Physiologic Systems, Analysis of Linear Control Systems in Time Domain, Analysis of Linear Control Systems in Frequency Domain, Stability Analysis, Identification of Physiologic Control Systems, Optimization, Non-linear Analysis of Physiologic Control Systems, Complex Dynamics in Physiologic Control Systems.
6BIOISY001 - Work Placement
Application in the field of biomedical engineering.
6MMFYGD001 - Engineering Economy
Cost-Volume-Profit Analysis/ Activity Resource Usage Model and Relevant Costing: Tactical Decision Making/ Capital Investment Decisions/ Inventory Management: Economic Order Quantity, JIT, and the Theory of Constraints/ Pricing and Revenue Analysis/ Profitability Analysis.
6BIOMAU011 - Graduation Project
Every reports of projects that have biomedical topics are submitted to jury.
6TOTTBA204 - Human Research Management
This course comprises basic information about human resources management and its various functions.
6UYDYGD001 - Labor and Social Security Law
In the field of individual labor law, the following topics are discussed and explained: the definition of a contract of employment, its types, obligations imposed on the parties, termination, working hours, rest break, paid holidays, annual leave pay as well as the subject of labor law, the birth of labor law, the development of labor law in the world and in Turkey, the basic concepts of business law.
In the field of collective labor law, the following topics are discussed and explained: trade unions, collective bargaining, the concept of strikes and lockouts, legal arrangements for resolution of collective labor disputes.
Under the social security law, the following topics are discussed and explained: the concept of social security, its historical development, mandatory social security agencies in Turkey and their scopes, definition of insurance branches, their scopes, and benefits provided to the insured and his/her family members.
6BIOMAS052 - Technical Elective Course-V-VI
Physiologic properties and phases of normal sleep, classification of sleep diseases, polysomnography methods, sleep apnea and technicals about diagnosis and treatment, practices of CPAP and BIPAP.
Introduction to data minig, their definitions, background, techniques, operations and algorithms of data mining, data mining problems, text minig, web mining, examples.
Artificial Intelligence is devoted to the computational study of intelligent behavior. The element that the fields of AI have in common is the creation of agents/machines that can 'think'. This course will cover a broad technical introduction to the techniques that enable agents/computers to behave intelligently: problem solving, representing knowledge, reasoning, learning, perceiving, and interpreting.
Taylor Polynomials: Taylor polynomial, error in Taylor polynomials, polynomial evaluation. Error and Computer Arithmetic: floating-point numbers, error definitions and sources, propagation error, error in summation, loops and inner products. Root Finding: Bisection method and error analysis, Newton method and error analysis, Secant method and error analysis, fixed point iteration, ill-behaving root finding problems. Interpolation and Approximation: polynomial interpolation, error in polynomial interpolation, interpolation using spline functions, minimax approximation, Chebyshev polynomials, least squares approximation. Numerical Integration and Differentiation: Trapezoidal and Simpson rules, error formulas, Gaussian numerical integration, numerical differentiation.
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